When operating DeepVariant, the software program might make the most of a delegated non permanent listing, reminiscent of `/tmp/tmpcgn0s8jv`, to retailer intermediate recordsdata generated in the course of the variant calling course of. This listing serves as a workspace for holding information like aligned reads, assembled candidate variants, and different non permanent outputs. The precise listing path, typically randomly generated inside the `/tmp` filesystem, ensures that these recordsdata are remoted and managed effectively.
Storing intermediate recordsdata in a delegated location affords a number of benefits. It facilitates environment friendly information administration, as all intermediate outputs are consolidated inside a single, simply accessible location. This streamlines the variant calling workflow and simplifies cleanup procedures after the evaluation completes. Moreover, using the non permanent filesystem (`/tmp`) leverages its inherent properties recordsdata saved inside `/tmp` are sometimes eliminated upon system reboot, stopping accumulation of pointless information. This automated cleanup mechanism contributes to environment friendly disk house utilization and reduces the chance of cluttering the first file system with non permanent information. This follow additionally promotes reproducibility, as subsequent runs might probably leverage cached information if out there and correctly configured.
